miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|114479333|gb|EE791701.1|EE791701 TGCGGCAGCGGTTGTCCCTGCCTCTCCGCCACCTCCACCTCGGCCTATCCCCGGGCTGGCGGCGCTGGCGGGGAGGGGGA
CAGTAGTTGTAGACGCTGCCCCTGCCTCAGAGAAGATACCACGTTGAGTGAGCAAAGACTGAACATTTTACAGATACCTT
TTGTAGAAGGCTTATAAGAACTAGTGCCATAATTTGAATCACAATGGATTTCACATTATGAGAGAATCCCTTGTCAAGCT
AATGAAGCATTCAAAGAAGACGTACGACTCTTTTCAAGATGAACTTGAAGATTATATCAAAGTGCAGAAAGCCAGAGGCT
TAGAGCCGAAGACTTGTTTCAGGAAGATGAGAGAGGATTATTTGGAAACCTATGGGTACAAAGAAGAGGTCGACTCTAGA
CCCAGGTGTAGAATGTTTGAGCAAAGACTCCCATATGGAACCGTCCAAACCTACCCAAGATCATGCAGTATTTCACAAAG
AGTGGAAAAGCAATTACCTCAGTGGCTACCAGCTCATGACAGCAGGCTGGGACTAGACTCCCTGAGCTACTCTCAGTT




Most similar to sp|Q17QQ9|KRCC1_BOVIN

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q17QQ9|KRCC1_BOVIN Lysine-rich coiled-coil protein 1 OS=Bos
           taurus GN=KRCC1 PE=2 SV=1
          Length = 257

 Score =  218 bits (556), Expect = 1e-56
 Identities = 104/105 (99%), Positives = 104/105 (99%)
 Frame = +2

Query: 242 MKHSKKTYDSFQDELEDYIKVQKARGLEPKTCFRKMREDYLETYGYKEEVDSRPRCRMFE 421
           MKHSKKTYDSFQDELEDYIKVQKARGLEPKTCFRKMREDYLETYGYKEEVDSRPRCRMFE
Sbjct: 1   MKHSKKTYDSFQDELEDYIKVQKARGLEPKTCFRKMREDYLETYGYKEEVDSRPRCRMFE 60

Query: 422 QRLPYGTVQTYPRSCSISQRVEKQLPQWLPAHDSRLGLDSLSYSQ 556
           QRLPYGTVQTYPRSCSISQRVEKQLPQWLPAHDSRL LDSLSYSQ
Sbjct: 61  QRLPYGTVQTYPRSCSISQRVEKQLPQWLPAHDSRLRLDSLSYSQ 105